Alyra Arabidopsis lyrata resources
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VCF Sample Selector

1 Select input VCF file

2 Select genomic region slice


3 Select lineages

Available Populations
admixed central-europe east-siberia karelia non-lyrata north-america northern-ural scandinavia siberia-sc west-siberia
Selected Populations

4 Select individual samples

Available Samples 0
IRK-ID51710 IRK-ID51711 IRK-ID51712 HVI-1_4n Ahal_CH_01 Ahal_CH_12 GYE4_4n GYE5_4n GYE6_4n GYE7_4n GYE9_4n OSL6 OSL7 OSL11 OSL12 OSL13 OSL8 OSL9 OSL10 PEK1_4n PEK3_4n PEK4_4n PEK5_4n PEK6_4n PEK7_4n PEK8_4n PEK9_4n PEK10_4n PEK11_4n PEK12_4n PEK13_4n GYE8_4n VLH7 TEM9_4n TEM10_4n TEM11_4n TEM12_4n TEM13_4n TEM8_4n TEM4_4n al1_1_4n LOM1 LOM2 LOM3 BRA5 BRA9 BRA11 BRA12 BRA13 TCM14 TCM02 TCM03 TCM04 TCM05 TCM06 TCM07 TCM08 TCM09 TCM10 TCM11 TCM12 TCM15 TCM13 KHM1 KHM2 KHM3 KHM4 KHM5 KHM6 KHM7 KHM8 KHM9 KHM10 KHM11 KHM12 KHM13 AHM1 AHM2 AHM3 AHM4 AHM5 AHM6 AHM7 AHM8 AHM9 AHM10 AHM11 AHM12 AHM13 VOG1_4n VOG2_4n VOG3_4n VOG4_4n VOG5_4n VOG6_4n VOG7_4n VOG8_4n VOG9_4n VOG10_4n al2_1_4n MOD4_4n OSL14 MOD5_4n al3_1_4n JOH1 JOH2 JOH3 JOH4 JOH5 JOH6 JOH7 JOH8 al4_1_4n PEK14_4n PEK15_4n PEK16_4n PEK17_4n NEU1 NEU2 BZD1_4n BZD2_4n BZD3_4n BZD4_4n BZD5_4n BZD6_4n BZD7_4n BZD8_4n STD1 STD2 STD3 STD4 STD5 STD6 STD7 STD8 SCT1_4n SCT2_4n SCT3_4n SCT4_4n SCT5_4n SCT6_4n SCT7_4n SCT8_4n SCT9_4n SCT10_4n STR5 STR6 STR7 STR8 STR9 TEM1_4n TEM2_4n TEM3_4n TEM6_4n TEM5_4n TEM7_4n MAL_4 Alyrp_IC_01 Alyrp_IC_30 Alyrp_PLS areGL1 areGL2 areMB1 areMB2 areNT1 areNU3 areNU4 areNU5 areQC1_01 areQC1_21 areQC2 areQC3 areQC4 areQC5 areQC6 areQC7 areSK1 areSK2 areSK3 BAM_12.1-1 BAM12.2-1 BAM12.3-1 BAM12.4-1 SPH_1 SPH_2 SPH_3 SPH_4 SPH_5 SPH_6 SPH_7 SPH_8 SPH_9 SPH_10 PLE_1 FRE02_4n FRE08_4n GYE12_4n GYE13_4n GYE15_4n HAB01_4n HAB02_4n HAB03_4n KAG09_4n KAG14_4n KAG15_4n KEH01_4n KEH04_4n LIC1_4n LIC2_4n LIC3_4n LOI1_4n LOI6_4n LOI8_4n MAU01_4n MAU02_4n MAU09_4n MOD1_4n MOD2_4n MOD3_4n OCH02_4n OCH06_4n PIZ6 PIZ9 PIZ8 PIZ11 PIL01_4n PIL02_4n PIL03_4n ROK01_4n ROK02_4n SCB02_4n SCB01_4n SEN_4n SWB1_4n SWB2_4n VLH2 VLH5 VLH6 PLE_4 PLE_5 PLE_6 PLE_7 PLE_8 PLE_9 PLE_10 PLE_11 PLE_12 PLE_13 IRK-ID2040 IRK-ID27652 IRK-ID61141 IRK-STAN IRKU048360 IRKU049793_4n IRKU049794 IRKU049797_4n IRKU049798 IRKU049802 IRKU049803_4n IRKU049804 IRKU084814 KAR1-1 KAR1-11 KAR1-12 lyrAB1 lyrAB2 lyrIA1_04 lyrIA1_26 lyrIA2_01 lyrIA2_27 lyrIL1_01 lyrIL1_22 lyrIL2_11 lyrIL2_20 lyrIN1_05 lyrIN1_30 lyrMD1_04 lyrMD1_23 lyrMD2_09 lyrMD2_29 lyrMD3_07 lyrMD3_23 lyrMD4_04 lyrMD4_28 lyrMI1_10 lyrMI1_12 lyrMI2_06 lyrMI2_29 lyrMI3_08a lyrMI3_24 lyrMI4_07 lyrMI4_32 lyrMI5_02 lyrMI5_17 lyrMI6_11 lyrMI6_34 lyrMO1_2 lyrMO1_40 lyrMO2_07 lyrMO2_28 lyrMO3_09 lyrMO3_28 lyrNC1_01 lyrNC1_13 lyrNC2_03 lyrNC2_29 lyrNC3_16 lyrNC3_30 lyrNC4_02 lyrNC4_07 lyrNJ1_01 lyrNJ1_26 lyrNY1_07 lyrNY1_18 lyrNY2_03 lyrNY2_25 lyrNY3_20 lyrNY3_22 lyrNY4_15 lyrNY4_24 lyrNY5_02 lyrNY5_19 lyrNY6_04 lyrNY6_19 lyrOH1_02 lyrOH1_30 lyrON1_03 lyrON1_20 lyrON10_05 lyrON10_30 lyrON11_03 lyrON11_27 lyrON11.1_02 lyrON11.1_24 lyrON12_03 lyrON12_30 lyrON2_03 lyrON2_30 lyrON3_02 lyrON3_27 lyrON4_06 lyrON4_24 lyrON5_03 lyrON5_25 lyrON6_01 lyrON6_28 lyrON7_01 lyrON7_29 lyrON8_04 lyrON8_16 lyrON9_03 lyrON9_25 lyrPA1_11 lyrPA1_23 lyrPA2_02 lyrPA2_29 lyrPA3_02 lyrPA3_27 lyrPA4_03 lyrPA4_19 lyrSK1 lyrSK2 lyrSK3 lyrSK4 lyrTN1_01 lyrTN1_08 lyrVA1_08 lyrVA1_29 lyrVA2_10 lyrVA2_27 lyrWI1_02 lyrWI1_25 lyrWI1.1 lyrWI2_04 lyrWI2_27 lyrWI3_18 lyrWI3_26 lyrWV1_05 lyrWV1_19 Medv_4n MN_47 Mort1-1 Mort2-1 Mort3-1 Mort4-1 MW0079456 MW0079466 MW0079467_1 MW0079472_4n MW0079473_1 MW0079475 MW0079478 MW0079478_3 MW0079479 MW0079480 MW0079480_3 MW0079481 MW0079481_2 MW0079482 MW0079482_2 MW0079483 MW0079484_2 MW0079485 MW0079485_2 MW0079486_2 MW0079486_3 MW0079491 MW0079491_2 MW0079493_1 MW0079494_2 MW0079496 MW0079497 MW0079497_4 MW0079500 MW0079500_2 MW0079507_4n MW0079509 MW0079510_1 MW0079537 MW0079537_3 MW0079538 MW0079543_2 MW0079544_4n MW0079545 MW0079546_2_4n MW0079546_4n MW0079552_2_4n MW0079552_3_4n MW0079552_4n MW0079552_7_4n MW0079552_8_4n MW0079553 MW0079553_5 MW0079553_7 MW0079558_2_4n MW0079559 MW0079560 MW0079561_8 MW0079561_9 MW0079564 MW0079564_2 MW0079568-1_1_4n MW0079568-2_1_4n MW0079568-3_1_4n MW0079568-4_1_4n MW0079569-2_1_4n MW0079570 MW0079572-1_4n MW0079572-2_4n MW0079572-3_1_4n MW0079573_1_4n MW0079573_3_4n MW0079573_4_4n MW0079573_4n MW0079573_5_4n MW0079575_4n MW0079577_2_4n MW0079578-1_4n MW0079579 MW0079581 MW0079582 MW0079583_1 MW0079583_2 MW0079583_3 MW0079584_4n MW0079585 MW0079587_4 MW0079587_6 MW0079589_11_4n MW0079589_4n MW0079589_8_4n MW0079589_9_4n MW0079591 MW0079604 MW0079604_5 MW0079605 MW0079606_4n MW0079608_2 MW0079608_3 MW0079609_3_4n MW0079609_4_4n MW0079609_4n MW0079610_4n MW0079729 MW0079895 MW0157476_2 MW0157478_2_4n MW0157478_4n MW0158706 MW0158707 MW0158708_4n MW0374083_4_4n MW0374083_4n MW0374083_6_4n MW0374084_2_4n MW0374084_4n MW0374085_1_4n MW0374085_11_4n MW0374087_4n MW0374087_5_4n MW0374087_9 MW0374094_6 MW0374095_4n MW0374101_4n MW0374102-2_4n Niv1-1 Niv2-1 Niv3-1 NT1_1_1 NT1_2_1 NT1_3_1 NT10_1_1 NT10_2_1 NT10_3_1 NT12_1_1 NT12_2_1 NT13_9_1 NT14_1_1 NT14_10_1 NT14_11_1 NT14_3_1 NT14_4_1 NT14_5_1 NT14_6_1 NT14_7_1 NT14_8_1 NT15_1_1 NT15_2_1 NT15_3_1 NT15_4_1 NT15_5_1 NT16.1-1 NT16.1-2 NT16.1-4 NT16.1-5 NT16.2-1 NT16.2-2 NT16.3-1 NT16.3-5 NT16.3-6 NT16.3-7 NT16.4-1 NT16.4-2 NT16.4-3 NT16.4-4 NT16.5-1 NT16.5-2 NT16.5-3 NT16.5-4 NT17.1-1 NT17.1-2 NT17.1-4 NT17.1-5 NT17.4-1 NT17.4-2 NT17.4-3 NT17.4-4 NT17.5-1 NT18-1 NT18-2 NT18-3 NT18-4 NT18-6 NT19.1-1 NT19.1-2 NT19.1-3 NT19.1-4 NT19.1-5 NT19.1-6 NT19.2-1 NT19.2-2 NT19.3-1 NT19.3-2 NT19.3-3 NT2_1_1 NT2_2_1 NT2_3_1 NT2_4_1 NT2_5_1 NT20.1-1 NT20.3-1 NT20.3-2 NT20.3-3 NT20.4-1 NT20.4-2 NT20.4-3 NT20.6-2 NT20.6-3 NT4_2_1 NT4_3_1 NT4.1 NT5_1_1 NT5_2_1 NT5_3_1 NT8_1_1 NT8_2_1 NT8_3_1 NT8_4_1 NT8_5_1 NT8.3-4 NT8.4-5 NT9_1_1 NT9_2_1 NT9_3_1 NT9_4_1 NT9_5_1 Mol1-1 Mol2-1 BRA1 BRA2 BRA3 BRA4 BRA6 BRA7 BRA8 BRA10 PU_1mix-1_4n PU_1mix-2_4n PU_2mix-1_4n PU_2mix-2_4n PU_3mix-1_4n PU_3mix-2_4n PU_4mix-1_4n PU_4mix-2_4n PU_5mix-1_4n PU_5mix-2_4n PU_6.1-1_4n PU_6.1-2_4n PU_6.2-1_4n PU_6.2-2_4n PU_6.3-1_4n PU_6.3-2_4n PU_6.4-1_4n PU_6.4-2_4n PU_6.5-1_4n PU_6.5-2_4n PU_6.6-1_4n PU_6.6-2_4n PU_6.7-1_4n PU_6.7-2_4n PU_6.8-1_4n PU_6.8-2_4n PU_6mix-1_4n PU_6mix-2_4n PU_7.1-1_4n PU_7.1-2_4n PU_7.2-1_4n PU_7.2-2_4n PU_7mix-1_4n PU_7mix-2_4n SAMD00089927_4n SAMD00089928_4n SAMD00089929_4n SAMD00089930_4n SAMD00089931_4n SAMD00089932_4n SAMD00089933_4n SAMD00089934_4n SAMD00089935_4n SAMD00089936_4n SAMD00089937_4n SAMD00089938_4n SAMD00089939_4n SAMD00089940_4n SAMD00089941_4n SAMD00089942_4n SAMD00089943_4n SAMD00089944_4n SAMD00089945_4n areNU1 areNU2 Acarpatica1 Acarpatica2 Acarpatica3 Acarpatica4 Acebennensis1 Acebennensis2 Acebennensis3 Acroatica1 Acroatica2 Ahalleridacica2 Ahallerigemmifera3 Ahallerihalleri1 Ahallerihalleri2 Ahalleriovirensis1 Ahalleriovirensis2 Ahalleritatrica1 Ahalleritatrica2 PIN1 PIN2 PLE_21 OSL4 HLY1 TCM1 BLA1 KAR005 KAR006 PIZ4 STR4 Anitida1 Anitida2 Anitida4 Apedemontana1 Apedemontana2 Apetraeaseptentrionalis1 Apetraeaseptentrionalis2_4n Apetraeaumbrosa2 Apetrogenapetrogena1 Apetrogenapetrogena2 Apetrogenapetrogena3 Aumezawana1 MOD6_4n FRE1_4n PIL4_4n OCH1_4n LOI2_4n Aneglectarobusta1_4n Aneglectarobusta2_4n Apetrogenaexoleta1_4n Apetrogenaexoleta2_4n Crubella Aneglectaneglecta1 Aarenosaarenosa1 Ahalleri Acarpatica5 Acarpatica6 Acarpatica7 Acarpatica8 PLE_20 POT1 PIZ1 VLH8 OSL1 MAL1 Aneglectaneglecta2 Aneglectaneglecta3 Aneglectaneglecta4 Anitida3 PEK2_4n KAR004 PLE_19 STO_2 SPN_2 STU6 MAY_6 KAR003 MAY_5 STU5 SPN_3 PLE_18 SPN_4 PLE_17 STU4 STO_1 PLE_16 PLE_15 MAY_3 MAY_4 KAR002 MAY_2 STU2 STU3 SPN_5 SPN_6 SPN_7 MAY_1 KAR001 STU1 PLE_14 SUN_1 SUN_2 SUN_3 SUN_4 GRO_1 GRO_2 GRO_3 GRO_4 GRO_5 SPN_1 LOM_4 LOM_5 LOM_6 LOM_7 LOM_8 LOM_9 LOM_10 LOM_11 LOM_12 SUN_5 SPN_8 SPN_9 SPN_10 SPN_11 SPN_12 SPN_13 VLH1 VLH3 MAL2 MAL3 OSL2 OSL3 PIZ3 PIZ2 PLE_3 PLE_2 POT3 POT2 STR2 STR1 STR3 NKM_1 NKM_2 NKM_3 NKM_4 NKM_5 NKM_6 NKM_7 NKM_8 NKM_9 TE_10.1-1 TE_10.1-2 TE_10.2-1 TE_10.2-2 TE_10.3-1 TE_10.3-2 TE_10.4-1 TE_10.4-2 TE_10.5-1 TE_10.5-2 TE_10.6-1 TE_10.6-2 TE_10.7-1 TE_10.7-2 TE_10.8-1 TE_10.8-2 TE_10.9-1 TE_10.9-2 TE_11.1-1 TE_11.1-2 TE_11.10-1 TE_11.10-2 TE_11.2-1 TE_11.2-2 TE_11.3-1 TE_11.3-2 TE_11.4-1 TE_11.4-2 TE_11.5-1 TE_11.5-2 TE_11.6-1 TE_11.6-2 TE_11.7-1 TE_11.7-2 TE_11.8-1 TE_11.8-2 TE_11.9-1 TE_11.9-2 TE_3.1-1 TE_3.1-2 TE_3.2-1 TE_3.2-2 TE_3.3-1 TE_3.3-2 TE_3.4-1 TE_3.4-2 TE_3.5-1 TE_3.5-2 TE_3.6-1 TE_3.6-2 TE_3.7-1 TE_3.7-2 TE_3.8-1 TE_3.8-2 TE_3.9-1 TE_3.9-2 TE_4.10-1 TE_4.10-2 TE_4.11-1 TE_4.11-2 TE_4.2-1 TE_4.2-2 TE_4.3-1 TE_4.3-2 TE_4.4-1 TE_4.4-2 TE_4.5-1 TE_4.5-2 TE_4.6-1 TE_4.6-2 TE_4.7-1 TE_4.8-1 TE_4.8-2 TE_4.9-1 TE_4.9-2 TE_5.1-1 TE_5.1-2 TE_5.10-1 TE_5.10-2 TE_5.2-1 TE_5.2-2 TE_5.3-1 TE_5.3-2 TE_5.4-1 TE_5.4-2 TE_5.5-1 TE_5.5-2 TE_5.6-1 TE_5.6-2 TE_5.7-1 TE_5.7-2 TE_5.8-1 TE_5.8-2 TE_5.9-1 TE_5.9-2 TE_6.1-1 TE_6.1-2 TE_6.2-1 TE_6.2-2 TE_7.1-1 TE_7.1-2 TE_7.2-1 TE_7.2-2 TE_7.3-1 TE_7.3-2 TE_7.4-1 TE_7.4-2 TE_7.5-1 TE_7.5-2 TE_7.6-1 TE_7.6-2 TE_7.7-1 TE_7.7-2 TE_7.8-1 TE_7.8-2 TE_7.9-1 TE_7.9-2 TE_7mix-1 TE_7mix-2 TE_8.1-1 TE_8.1-2 TE_8.10-1 TE_8.10-2 TE_8.2-1 TE_8.2-2 TE_8.3-1 TE_8.3-2 TE_8.4-1 TE_8.4-2 TE_8.5-1 TE_8.5-2 TE_8.6-1 TE_8.6-2 TE_8.7-1 TE_8.7-2 TE_8.8-1 TE_8.8-2 TE_8.9-1 TE_8.9-2 TE_8mix-1 TE_8mix-2 TE_9.1-1 TE_9.1-2 WS_1.1-1_4n WS_1.1-2_4n WS_1.2-1_4n WS_1.2-2_4n WS_1.3-1_4n WS_1.3-2_4n WS_1.4-1_4n WS_1.4-2_4n WS_1.5-1_4n WS_1.5-2_4n WS_1.6-1_4n WS_1.6-2_4n WS_1.7-1_4n WS_1.7-2_4n Anz-0 Balt1 Balt2 IP-Mur-0 IP-Per-0 KAR1-1.2 KAR1-10 KAR1-2 KAR1-3 KAR1-5 KAR1-6 KAR1-7 KAR1-8 KAR1-9 Liarum NT6-2 NT6-4 NT7-4 TE1-1 TE1-10 TE1-12 TE1-14 TE1-15 TE1-17 TE1-19 TE1-2 TE1-20 TE1-22 TE1-23 TE1-3 TE1-4 TE1-6 TE1-8 TE2-2 TE2-3 TE2-6 TE2-9 Ta-0 WestKar-4 col-0 com-1 dor-10
Selected Samples 0

5